libpappsomspp
Library for mass spectrometry
mzcalibrationinterface.cpp
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/**
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* \file pappsomspp/vendors/tims/mzcalibration/mzcalibrationinterface.cpp
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* \date 11/11/2020
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* \author Olivier Langella
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* \brief handles different ways to compute m/z using calibration parameters
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*/
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/*******************************************************************************
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* Copyright (c) 2020 Olivier Langella <Olivier.Langella@u-psud.fr>.
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*
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* This file is part of the PAPPSOms++ library.
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*
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* PAPPSOms++ is free software: you can redistribute it and/or modify
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* it under the terms of the GNU General Public License as published by
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* the Free Software Foundation, either version 3 of the License, or
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* (at your option) any later version.
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*
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* PAPPSOms++ is distributed in the hope that it will be useful,
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* but WITHOUT ANY WARRANTY; without even the implied warranty of
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* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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* GNU General Public License for more details.
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*
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* You should have received a copy of the GNU General Public License
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* along with PAPPSOms++. If not, see <http://www.gnu.org/licenses/>.
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*
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******************************************************************************/
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#include "
mzcalibrationinterface.h
"
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namespace
pappso
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{
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MzCalibrationInterface::MzCalibrationInterface
(
double
digitizerTimebase,
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double
digitizerDelay)
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: m_digitizerTimebase(digitizerTimebase), m_digitizerDelay(digitizerDelay)
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{
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}
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MzCalibrationInterface::~MzCalibrationInterface
()
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{
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}
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double
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MzCalibrationInterface::getTofFromTofIndex
(
double
index)
const
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{
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// mz calibration
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return
(index *
m_digitizerTimebase
) +
m_digitizerDelay
;
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}
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double
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MzCalibrationInterface::getTofFromTofIndex
(quint32 index)
const
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{
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// mz calibration
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return
((
double
)index *
m_digitizerTimebase
) +
m_digitizerDelay
;
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}
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}
// namespace pappso
mzcalibrationinterface.h
handles different ways to compute m/z using calibration parameters
pappso
tries to keep as much as possible monoisotopes, removing any possible C13 peaks and changes multichar...
Definition:
aa.cpp:39
pappso::MzCalibrationInterface::m_digitizerDelay
double m_digitizerDelay
Definition:
mzcalibrationinterface.h:97
pappso::MzCalibrationInterface::~MzCalibrationInterface
virtual ~MzCalibrationInterface()
Definition:
mzcalibrationinterface.cpp:40
pappso::MzCalibrationInterface::getTofFromTofIndex
double getTofFromTofIndex(quint32 tof_index) const
get time of flight from raw index
Definition:
mzcalibrationinterface.cpp:52
pappso::MzCalibrationInterface::m_digitizerTimebase
double m_digitizerTimebase
Definition:
mzcalibrationinterface.h:96
pappso::MzCalibrationInterface::MzCalibrationInterface
MzCalibrationInterface(double digitizerTimebase, double digitizerDelay)
Definition:
mzcalibrationinterface.cpp:34
pappsomspp
vendors
tims
mzcalibration
mzcalibrationinterface.cpp
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